MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Granulicatella sp.
19428wC4_WM01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 219
bases: 2,027,228 bps
CDS: 1,683
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 1,736
Total number of protein coding genes annotated/found:
1,683
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5034|JADGLB010000001.1
SEQF5034_00431
Genome Viewer
NA
AA
6660/2220
91054-97713
Beta-galactosidase
SEQF5034|JADGLB010000002.1
SEQF5034_00675
Genome Viewer
NA
AA
6654/2218
24843-18190
hypothetical protein
SEQF5034|JADGLB010000034.1
SEQF5034_00835
Genome Viewer
NA
AA
5634/1878
19989-14356
Endo-alpha-N-acetylgalactosaminidase
SEQF5034|JADGLB010000021.1
SEQF5034_00463
Genome Viewer
NA
AA
5220/1740
8456-13675
hypothetical protein
SEQF5034|JADGLB010000066.1
SEQF5034_01395
Genome Viewer
NA
AA
4959/1653
5518-560
hypothetical protein
SEQF5034|JADGLB010000029.1
SEQF5034_00656
Genome Viewer
NA
AA
4374/1458
16141-11768
Type VII secretion system protein EssC
SEQF5034|JADGLB010000001.1
SEQF5034_00430
Genome Viewer
NA
AA
4338/1446
86697-91034
hypothetical protein
SEQF5034|JADGLB010000023.1
SEQF5034_00523
Genome Viewer
NA
AA
4338/1446
17230-21567
DNA polymerase III PolC-type
SEQF5034|JADGLB010000001.1
SEQF5034_00432
Genome Viewer
NA
AA
4323/1441
97752-102074
hypothetical protein
SEQF5034|JADGLB010000018.1
SEQF5034_00301
Genome Viewer
NA
AA
4242/1414
5670-9911
hypothetical protein
SEQF5034|JADGLB010000016.1
SEQF5034_00244
Genome Viewer
NA
AA
4149/1383
146-4294
hypothetical protein
SEQF5034|JADGLB010000031.1
SEQF5034_00766
Genome Viewer
NA
AA
4101/1367
10086-14186
hypothetical protein
SEQF5034|JADGLB010000020.1
SEQF5034_00452
Genome Viewer
NA
AA
4002/1334
23261-27262
hypothetical protein
SEQF5034|JADGLB010000035.1
SEQF5034_00837
Genome Viewer
NA
AA
3861/1287
4937-1077
hypothetical protein
SEQF5034|JADGLB010000093.1
SEQF5034_01678
Genome Viewer
NA
AA
3759/1253
4319-561
hypothetical protein
SEQF5034|JADGLB010000028.1
SEQF5034_00638
Genome Viewer
NA
AA
3747/1249
17230-20976
hypothetical protein
SEQF5034|JADGLB010000002.1
SEQF5034_00694
Genome Viewer
NA
AA
3735/1245
47594-43860
ATP-dependent helicase/nuclease subunit A
SEQF5034|JADGLB010000038.1
SEQF5034_00899
Genome Viewer
NA
AA
3720/1240
14723-11004
DNA-directed RNA polymerase subunit beta'
SEQF5034|JADGLB010000005.1
SEQF5034_01317
Genome Viewer
NA
AA
3672/1224
29839-33510
Phosphoribosylformylglycinamidine synthase
SEQF5034|JADGLB010000038.1
SEQF5034_00900
Genome Viewer
NA
AA
3624/1208
18586-14963
DNA-directed RNA polymerase subunit beta
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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